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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810196.1_cds_XP_016496098.1_10355
CDS Infomation

[gene=LOC107815095] [db_xref=GeneID:107815095] [protein=E3 ubiquitin-protein ligase At4g11680-like isoform X2] [protein_id=XP_016496098.1] [location=join(11687..12138,15086..15205,15580..15910,16363..16409,16607..16646)] [gbkey=CDS]
Sequence

ATGGACCAAGAATTTCAAAGAAATATAATTAGTGAAAATGGTGGTTTTGAACATAGTTAT
TTTAGAGGCTTAGGTACCCCTTTTTCTTTGTATTTTTCAAGAATGGCCTCTTTTTTAAAC
CTACAAAACCACTATCAAAGTTTTGATGATGATGGGGTTGTTTCTTATGATGATGATTAT
GCATCACCATTTAGTTATTATGGGTACTCAAGACCTATTGTGGTTCTTGATGTAATATGG
AACTTGGCATTTGTTTGTGTTTCTTGTTTTGTGCTATTGACAACTATAAGTGAAAGGCCT
TCTACTCCTTTAAGGCTTTGGATTGGTGGTTATGCACTTCAGTGCCTATTGCATGTGGGT
TTTATTTGGATTGAGTTTCAAAGAAGGAGTTTTGATGATTTTGATGCTGTCAATTTTGAT
GGGGCTTCTTCTTTTTCACTGTTTCAAAGCAGCATCATGAAGAGGCTGGAATCAGTTAAC
ACTGTGATTTCATCAATCTGGTGGGTATTTGGCTTTTACTGGATTGTTATGGGTGGCCAG
CCACTTCTGCAAGACTCACCTCGTCTTTACTGGTTATCAGTGGTCTTCCTTGCATTTGAT
GTGTTCTTTATGGTCTTTTGCATTGTGATGGCATTTGTACTCTTCTTCGCGTTCTTTTGT
TTCTTTCCATTTATAGCAACAGTTGCATATGCCATGAGACTTGGAGATGGAGCATCTGAA
AATGATATCAAGACTCTTCCCAAGTATAGATATGGTCAATCAAATACTACAGGGAACCTT
GTAAATGTGAAGACAGGAGAAGATCACTTAAATGTTAATGTGAAGACAGGAGAAGATCAC
TTCGCATCACAGTTCAACAGTAGTGATTCTGTACCTGAGCTTGCTCTTCAACCAGATGAT
TCTAGTGGACAAAGTAGAAGAACGGAGAGTCAATGTCATATTCAGATGGAGAGTGCTGCA
TATGCCTTTATAAATATTTGGATGGAGTAG

Peptide Sequence

PEP ID

XP_016496098.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Nicotiana tabacum]
Sequence

MDQEFQRNIISENGGFEHSYFRGLGTPFSLYFSRMASFLNLQNHYQSFDDDGVVSYDDDY
ASPFSYYGYSRPIVVLDVIWNLAFVCVSCFVLLTTISERPSTPLRLWIGGYALQCLLHVG
FIWIEFQRRSFDDFDAVNFDGASSFSLFQSSIMKRLESVNTVISSIWWVFGFYWIVMGGQ
PLLQDSPRLYWLSVVFLAFDVFFMVFCIVMAFVLFFAFFCFFPFIATVAYAMRLGDGASE
NDIKTLPKYRYGQSNTTGNLVNVKTGEDHLNVNVKTGEDHFASQFNSSDSVPELALQPDD
SSGQSRRTESQCHIQMESAAYAFINIWME

Transcript Sequence

Gene sequence data has not been registered.